MCP_0617 protein (Methanocella paludicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MCP_0617

4Fe-4S ferredoxin, iron-sulfur binding protein. (138 aa)

Predicted Functional Partners:

MCP_0618

0.980

MCP_0658

0.868

MCP_1258

0.868

MCP_2614

0.868

MCP_1257

0.855

MCP_2613

0.855

MCP_2640

0.844

MCP_1255

0.830

MCP_2612

0.830

echF

0.806

Your Current Organism:

Methanocella paludicola

NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCP_0617	MCP_0618	MCP_0617	MCP_0618	4Fe-4S ferredoxin, iron-sulfur binding protein.	Tungsten-containing aldehyde ferredoxin oxidoreductase.	0.980
MCP_0617	MCP_0658	MCP_0617	MCP_0658	4Fe-4S ferredoxin, iron-sulfur binding protein.	Tungsten-containing aldehyde ferredoxin oxidoreductase.	0.868
MCP_0617	MCP_1255	MCP_0617	MCP_1255	4Fe-4S ferredoxin, iron-sulfur binding protein.	Pyruvate synthase delta chain; Similar to Ketoisovalerate oxidoreductase delta subunit VorB in Pyrococcus furiosus (Q51800).	0.830
MCP_0617	MCP_1257	MCP_0617	MCP_1257	4Fe-4S ferredoxin, iron-sulfur binding protein.	Similar to Ketoisovalerate oxidoreductase alpha chain VorA in Pyrococcus furiosus (Q51801).	0.855
MCP_0617	MCP_1258	MCP_0617	MCP_1258	4Fe-4S ferredoxin, iron-sulfur binding protein.	Pyruvate synthase beta chain; Similar to Ketoisovalerate oxidoreductase beta VorB in Pyrococcus furiosus (Q51802).	0.868
MCP_0617	MCP_2612	MCP_0617	MCP_2612	4Fe-4S ferredoxin, iron-sulfur binding protein.	Similar to Pyruvate synthase delta chain PorB in Pyrococcus furiosus (Q51803).	0.830
MCP_0617	MCP_2613	MCP_0617	MCP_2613	4Fe-4S ferredoxin, iron-sulfur binding protein.	Similar to Pyruvate synthase alpha chain PorA in Pyrococcus furiosus (Q51804).	0.855
MCP_0617	MCP_2614	MCP_0617	MCP_2614	4Fe-4S ferredoxin, iron-sulfur binding protein.	Similar to Pyruvate synthase beta chain PorB in Pyrococcus furiosus (Q51805).	0.868
MCP_0617	MCP_2640	MCP_0617	MCP_2640	4Fe-4S ferredoxin, iron-sulfur binding protein.	Putative [NiFe]-hydrogenase large subunit.	0.844
MCP_0617	echF	MCP_0617	MCP_0477	4Fe-4S ferredoxin, iron-sulfur binding protein.	Ech hydrogenase subunit F.	0.806
MCP_0618	MCP_0617	MCP_0618	MCP_0617	Tungsten-containing aldehyde ferredoxin oxidoreductase.	4Fe-4S ferredoxin, iron-sulfur binding protein.	0.980
MCP_0618	MCP_0658	MCP_0618	MCP_0658	Tungsten-containing aldehyde ferredoxin oxidoreductase.	Tungsten-containing aldehyde ferredoxin oxidoreductase.	0.909
MCP_0618	echF	MCP_0618	MCP_0477	Tungsten-containing aldehyde ferredoxin oxidoreductase.	Ech hydrogenase subunit F.	0.575
MCP_0658	MCP_0617	MCP_0658	MCP_0617	Tungsten-containing aldehyde ferredoxin oxidoreductase.	4Fe-4S ferredoxin, iron-sulfur binding protein.	0.868
MCP_0658	MCP_0618	MCP_0658	MCP_0618	Tungsten-containing aldehyde ferredoxin oxidoreductase.	Tungsten-containing aldehyde ferredoxin oxidoreductase.	0.909
MCP_0658	echF	MCP_0658	MCP_0477	Tungsten-containing aldehyde ferredoxin oxidoreductase.	Ech hydrogenase subunit F.	0.623
MCP_1255	MCP_0617	MCP_1255	MCP_0617	Pyruvate synthase delta chain; Similar to Ketoisovalerate oxidoreductase delta subunit VorB in Pyrococcus furiosus (Q51800).	4Fe-4S ferredoxin, iron-sulfur binding protein.	0.830
MCP_1255	MCP_1257	MCP_1255	MCP_1257	Pyruvate synthase delta chain; Similar to Ketoisovalerate oxidoreductase delta subunit VorB in Pyrococcus furiosus (Q51800).	Similar to Ketoisovalerate oxidoreductase alpha chain VorA in Pyrococcus furiosus (Q51801).	0.999
MCP_1255	MCP_1258	MCP_1255	MCP_1258	Pyruvate synthase delta chain; Similar to Ketoisovalerate oxidoreductase delta subunit VorB in Pyrococcus furiosus (Q51800).	Pyruvate synthase beta chain; Similar to Ketoisovalerate oxidoreductase beta VorB in Pyrococcus furiosus (Q51802).	0.999
MCP_1255	MCP_2612	MCP_1255	MCP_2612	Pyruvate synthase delta chain; Similar to Ketoisovalerate oxidoreductase delta subunit VorB in Pyrococcus furiosus (Q51800).	Similar to Pyruvate synthase delta chain PorB in Pyrococcus furiosus (Q51803).	0.908

page 1 of 4

Server load: low (10%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About