Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0617 | MCP_0618 | MCP_0617 | MCP_0618 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.975 |
MCP_0617 | MCP_0619 | MCP_0617 | MCP_0619 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Putative glutaredoxin. | 0.613 |
MCP_0617 | MCP_0658 | MCP_0617 | MCP_0658 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.894 |
MCP_0617 | MCP_2644 | MCP_0617 | MCP_2644 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.421 |
MCP_0617 | MCP_2665 | MCP_0617 | MCP_2665 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | ABC transporter permease protein. | 0.502 |
MCP_0617 | moeA-1 | MCP_0617 | MCP_2799 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Putative molybdopterin biosynthesis protein. | 0.414 |
MCP_0617 | trxB-1 | MCP_0617 | MCP_0620 | 4Fe-4S ferredoxin, iron-sulfur binding protein. | Putative thioredoxin reductase. | 0.605 |
MCP_0618 | MCP_0617 | MCP_0618 | MCP_0617 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.975 |
MCP_0618 | MCP_0619 | MCP_0618 | MCP_0619 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | Putative glutaredoxin. | 0.616 |
MCP_0618 | MCP_0658 | MCP_0618 | MCP_0658 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.909 |
MCP_0618 | MCP_1988 | MCP_0618 | MCP_1988 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | Putative glycerate kinase. | 0.901 |
MCP_0618 | MCP_2644 | MCP_0618 | MCP_2644 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.929 |
MCP_0618 | MCP_2665 | MCP_0618 | MCP_2665 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | ABC transporter permease protein. | 0.733 |
MCP_0618 | MCP_2804 | MCP_0618 | MCP_2804 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | ABC transporter permease protein. | 0.613 |
MCP_0618 | MCP_2918 | MCP_0618 | MCP_2918 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | acetyl-CoA synthetase. | 0.577 |
MCP_0618 | moeA-1 | MCP_0618 | MCP_2799 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | Putative molybdopterin biosynthesis protein. | 0.669 |
MCP_0618 | trxB-1 | MCP_0618 | MCP_0620 | Tungsten-containing aldehyde ferredoxin oxidoreductase. | Putative thioredoxin reductase. | 0.558 |
MCP_0619 | MCP_0617 | MCP_0619 | MCP_0617 | Putative glutaredoxin. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.613 |
MCP_0619 | MCP_0618 | MCP_0619 | MCP_0618 | Putative glutaredoxin. | Tungsten-containing aldehyde ferredoxin oxidoreductase. | 0.616 |
MCP_0619 | trxB-1 | MCP_0619 | MCP_0620 | Putative glutaredoxin. | Putative thioredoxin reductase. | 0.752 |
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