STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0638Putative phosphoadenosine phosphosulfate reductase. (632 aa)    
Predicted Functional Partners:
cysC
Putative adenylyl-sulfate kinase.
 
 0.998
MCP_1358
Putative phosphoadenosine phosphosulfate reductase.
 
 
0.932
MCP_0080
Conserved hypothetical protein; Contains at least two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
  
  
 0.868
MCP_1659
Sulfate adenylyltransferase.
  
  
 0.857
cobA
uroporphyrin-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
  
 0.809
MCP_1862
ABC transporter permease protein.
  
  
 0.804
hisH
Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.
     
 0.800
MCP_0640
Conserved hypothetical protein; Belongs to the GtrA-like protein family (IPR007267).
  
    0.787
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.762
MCP_1732
Sulfite reductase.
 
   
 0.695
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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