STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dutProbable deoxyuridine 5'-triphosphate nucleotidohydrolase. (165 aa)    
Predicted Functional Partners:
thyA
Thymidylate synthase.
 
 
 0.962
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate.
  
 
 0.946
tmk
Probable thymidylate kinase.
  
 
 0.937
MCP_0097
Conserved hypothetical protein; Contains one CMP/dCMP deaminase, zinc-binding domain (IPR002125).
    
 0.931
MCP_0166
Putative thymidylate kinase.
  
 
 0.931
surE
5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
 0.918
nrdD
Anaerobic ribonucleoside-triphosphate reductase.
    
 0.916
MCP_0645
Conserved hypothetical protein; Contains one Protein of unknown function UPF0066 domain (IPR001378).
       0.776
MCP_0646
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF124 family (IPR002838).
       0.610
MCP_0647
Hypothetical protein.
       0.579
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.