STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0652Conserved hypothetical protein; Belongs to the NGG1p interacting factor 3, NIF3 family (IPR002678). (251 aa)    
Predicted Functional Partners:
MCP_0651
Conserved hypothetical protein; Contains one Zinc finger, SWIM-type domain (IPR007527).
       0.800
MCP_2159
Similar to alpha-aminoadipate aminotransferase LysN in Thermus thermophilus (Q7X567).
 
    0.637
MCP_0650
Conserved hypothetical protein.
       0.623
moaA
Probable molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
       0.538
rfbB
dTDP-glucose 4,6-dehydratase.
  
    0.515
MCP_1382
Conserved hypothetical protein.
  
    0.508
hisC
Histidinol-phosphate aminotransferase.
 
  
 0.498
MCP_1952
L-threonine-O-3-phosphate decarboxylase.
 
  
 0.494
MCP_0952
Hypothetical protein; Contains one Glycosyl transferase, family 2 domain (IPR001173); Contains one Phosphoglycerate mutase domain (IPR013078).
  
  
 0.489
MCP_1181
Conserved hypothetical protein.
 
  
 0.469
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.