STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0670Putative amino acid kinase. (203 aa)    
Predicted Functional Partners:
MCP_1325
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF66 family (IPR002756); Belongs to the Hydantoinase/oxoprolinase family (IPR002821).
 
  
 0.981
MCP_1841
Putative aspartate aminotransferase.
    
 0.908
mfnB
Conserved hypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P).
 
   
 0.809
MCP_1324
Conserved hypothetical protein; Contains one ATP-grasp fold, DUF201-type domain (IPR003806).
 
   
 0.797
MCP_0453
Belongs to the Dihydropteroate synthase-related protein synthase-related protein family (IPR005236).
 
   
 0.791
MCP_0671
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF81 family (IPR002781).
       0.773
MCP_2811
Conserved hypothetical protein; Contains one Histidine biosynthesis domain (IPR006062); Belongs to the HisA/HisF family.
 
   
 0.748
fwdA-1
Tungsten-containing formylmethanofuran dehydrogenase subunit A.
 
   
 0.746
fwdA-2
Tungsten-containing formylmethanofuran dehydrogenase subunit A.
 
   
 0.746
MCP_1183
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF447 family (IPR007386).
 
   
 0.738
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.