STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCP_0682Conserved hypothetical protein; Belongs to the Protein of unknown function DUF318, transmembrane family (IPR005524). (325 aa)    
Predicted Functional Partners:
MCP_0676
Conserved hypothetical protein; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
 
  
 0.842
MCP_0683
Putative arsenite resistance protein.
  
  
 0.755
MCP_0679
Conserved hypothetical protein.
  
  
 0.619
MCP_0687
ArsR family transcriptional regulator.
  
  
 0.561
MCP_0681
Conserved hypothetical protein.
       0.556
trxB-2
Putative thioredoxin reductase.
     
 0.531
MCP_0274
Conserved hypothetical protein; Contains two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
  
    0.437
mtrA-2
Putative tetrahydromethanopterin S-methyltransferase subunit A.
       0.412
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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