STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0694Putative haloacid dehalogenase. (243 aa)    
Predicted Functional Partners:
MCP_0693
Conserved hypothetical protein; Contains one Aminoglycoside phosphotransferase domain (IPR002575).
       0.783
phoU-1
Phosphate transport system protein PhoU; Plays a role in the regulation of phosphate uptake.
     
 0.782
aqpM
Aquaporin.
  
 
 0.749
MCP_0692
Hypothetical protein.
       0.568
MCP_0696
Conserved hypothetical protein; Contains one CBS domain (IPR000644).
       0.543
MCP_2008
Putative haloacid dehalogenase.
 
 
 0.468
MCP_2603
Putative haloacid dehalogenase.
 
 
 0.443
MCP_0691
PspA/IM30 family protein.
       0.441
MCP_0690
Conserved hypothetical protein.
       0.435
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.