STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0699Conserved hypothetical protein; Belongs to the Protein of unknown function DUF366 family (IPR007162). (184 aa)    
Predicted Functional Partners:
queE
Conserved hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.
 
     0.960
queC
Archaeosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
 
     0.951
MCP_0697
Putative 6-pyruvoyl tetrahydrobiopterin synthase.
 
     0.931
MCP_0701
Conserved hypothetical protein.
       0.773
MCP_1943
Conserved hypothetical protein; Contains one MoaA/nifB/pqqE, iron-sulphur binding domain (IPR000385); Contains one Radical SAM domain (IPR007197).
 
     0.615
MCP_0702
Hypothetical protein.
       0.545
MCP_0436
Putative thiamine-monophosphate kinase.
       0.529
MCP_1181
Conserved hypothetical protein.
       0.449
MCP_2880
Conserved hypothetical protein; Belongs to the HI0933-like family (IPR004792).
  
     0.432
secF
Putative protein-export membrane protein SecF; Involved in protein export.
 
     0.412
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.