Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0725 | MCP_0727 | MCP_0725 | MCP_0727 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Methyltransferase. | 0.800 |
MCP_0725 | MCP_0730 | MCP_0725 | MCP_0730 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Putative RNA methyltransferase. | 0.595 |
MCP_0725 | MCP_0731 | MCP_0725 | MCP_0731 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Putative phosphoesterase. | 0.482 |
MCP_0725 | MCP_0732 | MCP_0725 | MCP_0732 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0047 family (IPR001602). | 0.476 |
MCP_0725 | ksgA | MCP_0725 | MCP_0726 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Probable dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.842 |
MCP_0725 | moaC | MCP_0725 | MCP_0729 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Probable molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.522 |
MCP_0725 | nnrE | MCP_0725 | MCP_0728 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.632 |
MCP_0727 | MCP_0725 | MCP_0727 | MCP_0725 | Methyltransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | 0.800 |
MCP_0727 | MCP_0730 | MCP_0727 | MCP_0730 | Methyltransferase. | Putative RNA methyltransferase. | 0.711 |
MCP_0727 | MCP_0731 | MCP_0727 | MCP_0731 | Methyltransferase. | Putative phosphoesterase. | 0.487 |
MCP_0727 | MCP_0732 | MCP_0727 | MCP_0732 | Methyltransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0047 family (IPR001602). | 0.482 |
MCP_0727 | ksgA | MCP_0727 | MCP_0726 | Methyltransferase. | Probable dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.887 |
MCP_0727 | moaC | MCP_0727 | MCP_0729 | Methyltransferase. | Probable molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.578 |
MCP_0727 | nnrE | MCP_0727 | MCP_0728 | Methyltransferase. | Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...] | 0.632 |
MCP_0730 | MCP_0725 | MCP_0730 | MCP_0725 | Putative RNA methyltransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF655 family (IPR007003). | 0.595 |
MCP_0730 | MCP_0727 | MCP_0730 | MCP_0727 | Putative RNA methyltransferase. | Methyltransferase. | 0.711 |
MCP_0730 | MCP_0731 | MCP_0730 | MCP_0731 | Putative RNA methyltransferase. | Putative phosphoesterase. | 0.697 |
MCP_0730 | MCP_0732 | MCP_0730 | MCP_0732 | Putative RNA methyltransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0047 family (IPR001602). | 0.697 |
MCP_0730 | MCP_1181 | MCP_0730 | MCP_1181 | Putative RNA methyltransferase. | Conserved hypothetical protein. | 0.572 |
MCP_0730 | ksgA | MCP_0730 | MCP_0726 | Putative RNA methyltransferase. | Probable dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily. | 0.665 |
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