Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0635 | MCP_0757 | Putative isochorismatase hydrolase. | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | 0.472 |
MCP_0755 | MCP_0756 | HxlR family transcriptional regulator. | Putative 4-oxalocrotonate tautomerase. | 0.510 |
MCP_0755 | MCP_0757 | HxlR family transcriptional regulator. | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | 0.504 |
MCP_0756 | MCP_0755 | Putative 4-oxalocrotonate tautomerase. | HxlR family transcriptional regulator. | 0.510 |
MCP_0756 | MCP_0757 | Putative 4-oxalocrotonate tautomerase. | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | 0.741 |
MCP_0756 | MCP_0758 | Putative 4-oxalocrotonate tautomerase. | Hypothetical protein. | 0.408 |
MCP_0757 | MCP_0635 | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | Putative isochorismatase hydrolase. | 0.472 |
MCP_0757 | MCP_0755 | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | HxlR family transcriptional regulator. | 0.504 |
MCP_0757 | MCP_0756 | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | Putative 4-oxalocrotonate tautomerase. | 0.741 |
MCP_0757 | MCP_0758 | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | Hypothetical protein. | 0.423 |
MCP_0758 | MCP_0756 | Hypothetical protein. | Putative 4-oxalocrotonate tautomerase. | 0.408 |
MCP_0758 | MCP_0757 | Hypothetical protein. | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | 0.423 |