Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0767Conserved hypothetical protein. (256 aa)    
Predicted Functional Partners:
MCP_0768
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152).
     0.887
MCP_0766
Putative glycosyltransferase.
 
  
 0.860
MCP_0769
Conserved hypothetical protein.
 
     0.792
MCP_0770
Conserved hypothetical protein.
 
     0.784
MCP_0844
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152).
     0.756
MCP_0850
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152).
     0.730
MCP_0779
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152).
     0.708
MCP_0763
Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451).
 
   
 0.648
MCP_0771
Putative glycosyltransferase.
  
  
 0.612
MCP_0244
Hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216); Contains two Glycosyl transferase, family 2 domains (IPR001173).
  
  
 0.598
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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