Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0763 | MCP_0765 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Putative oxidoreductase. | 0.788 |
MCP_0763 | MCP_0766 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Putative glycosyltransferase. | 0.633 |
MCP_0763 | MCP_0767 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Conserved hypothetical protein. | 0.649 |
MCP_0763 | MCP_0768 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152). | 0.559 |
MCP_0763 | MCP_0769 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Conserved hypothetical protein. | 0.619 |
MCP_0763 | MCP_0770 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Conserved hypothetical protein. | 0.506 |
MCP_0763 | MCP_0771 | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | Putative glycosyltransferase. | 0.468 |
MCP_0765 | MCP_0763 | Putative oxidoreductase. | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | 0.788 |
MCP_0765 | MCP_0766 | Putative oxidoreductase. | Putative glycosyltransferase. | 0.658 |
MCP_0765 | MCP_0767 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.587 |
MCP_0765 | MCP_0768 | Putative oxidoreductase. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152). | 0.492 |
MCP_0765 | MCP_0769 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.478 |
MCP_0765 | MCP_0770 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.517 |
MCP_0765 | MCP_0771 | Putative oxidoreductase. | Putative glycosyltransferase. | 0.509 |
MCP_0766 | MCP_0763 | Putative glycosyltransferase. | Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451). | 0.633 |
MCP_0766 | MCP_0765 | Putative glycosyltransferase. | Putative oxidoreductase. | 0.658 |
MCP_0766 | MCP_0767 | Putative glycosyltransferase. | Conserved hypothetical protein. | 0.869 |
MCP_0766 | MCP_0768 | Putative glycosyltransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152). | 0.805 |
MCP_0766 | MCP_0769 | Putative glycosyltransferase. | Conserved hypothetical protein. | 0.771 |
MCP_0766 | MCP_0770 | Putative glycosyltransferase. | Conserved hypothetical protein. | 0.713 |
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