STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0797Putative cobalt ABC transporter ATP binding protein. (292 aa)    
Predicted Functional Partners:
MCP_0798
Putative cobalt ABC transporter permease protein.
 
 0.989
MCP_1084
Putative cobalt ABC transporter permease protein.
 
 0.965
MCP_0796
Putative cobalamin biosynthesis protein.
 
 
 0.960
MCP_1083
Putative cobalt ABC transporter ATP binding protein.
  
  
 
0.914
MCP_1085
Putative truncated cobalamin biosynthesis protein.
 
 
 0.914
MCP_1561
Putative peptide ABC transporter ATP binding protein.
   
0.907
MCP_0450
Putative cobalt ABC transporter ATP binding protein.
  
  
 
0.902
MCP_1087
Conserved hypothetical protein.
 
 
 0.870
MCP_1086
Putative truncated cobalamin biosynthesis protein.
 
 
 0.867
MCP_1306
Putative cobalt ABC transporter.
 
 
 0.832
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.