STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0798Putative cobalt ABC transporter permease protein. (265 aa)    
Predicted Functional Partners:
MCP_0797
Putative cobalt ABC transporter ATP binding protein.
 
 0.993
MCP_0796
Putative cobalamin biosynthesis protein.
  
 0.986
MCP_1083
Putative cobalt ABC transporter ATP binding protein.
 
 0.981
MCP_0450
Putative cobalt ABC transporter ATP binding protein.
 
 0.977
MCP_1085
Putative truncated cobalamin biosynthesis protein.
 
 0.976
MCP_1086
Putative truncated cobalamin biosynthesis protein.
 
 0.971
MCP_1087
Conserved hypothetical protein.
 
 0.971
MCP_1084
Putative cobalt ABC transporter permease protein.
  
  
  0.951
MCP_0380
Putative cobalt ABC transporter ATP binding protein.
 
 
 0.873
MCP_0381
Putative cobalt ABC transporter ATP binding protein.
 
 
 0.873
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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