STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0811Putative flavodoxin. (152 aa)    
Predicted Functional Partners:
MCP_0812
Conserved hypothetical protein; Contains two Protein of unknown function DUF6, transmembrane domains (IPR000620).
       0.717
hisB
Imidazoleglycerol-phosphate dehydratase.
       0.658
MCP_0810
Conserved hypothetical protein; Contains two Protein of unknown function DUF6, transmembrane domains (IPR000620).
       0.658
sor
Putative superoxide reductase.
  
  
 0.545
MCP_0808
Conserved hypothetical protein.
       0.538
MCP_1732
Sulfite reductase.
  
  
 0.473
MCP_0807
Putative signaling protein; Contains three PAS domains (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains one PAC motif repeat (IPR001610).
       0.443
MCP_0679
Conserved hypothetical protein.
   
  
 0.413
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.