STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0819Hydrolase. (262 aa)    
Predicted Functional Partners:
MCP_2176
Conserved hypothetical protein.
   
 0.701
MCP_0073
Conserved hypothetical protein; Contains one Metallophosphoesterase domain (IPR004843).
   
 0.691
MCP_0934
Conserved hypothetical protein; Contains one Metallophosphoesterase domain (IPR004843).
   
 0.691
MCP_1877
Putative phosphoesterase; Belongs to the Protein of unknown function UPF0025 family (IPR000979).
   
 0.691
MCP_1878
Putative phosphoesterase; Belongs to the Protein of unknown function UPF0025 family (IPR000979).
   
 0.691
pdhB
Pyruvate dehydrogenase E1 component beta subunit.
 
  
 0.687
MCP_2598
NADH oxidase.
  
 
 0.685
MCP_2748
acyl-CoA C-acyltransferases.
 
  
 0.541
MCP_1774
Hypothetical protein; Contains at least one Ankyrin repeatrepeat (IPR002110); Contains at least one PBS lyase HEAT-like repeat (IPR004155).
  
 0.478
MCP_0933
Hypothetical protein; Contains at least one Ankyrin repeat (IPR002110).
  
 0.477
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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