MCP_0834 protein (Methanocella paludicola) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MCP_0834

Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610). (778 aa)

Predicted Functional Partners:

MCP_2581

0.538

MCP_0835

0.483

MCP_2253

0.459

MCP_1444

0.453

MCP_1650

0.445

MCP_2616

0.435

MCP_0475

0.420

Your Current Organism:

Methanocella paludicola

NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
MCP_0475	MCP_0834	Putative response regulator.	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	0.420
MCP_0475	MCP_1650	Putative response regulator.	Putative response regulator.	0.825
MCP_0475	MCP_2253	Putative response regulator.	Putative signaling protein; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains PAC motif repeats (IPR001610).	0.651
MCP_0475	MCP_2581	Putative response regulator.	Putative response regulator.	0.534
MCP_0475	MCP_2616	Putative response regulator.	Putative histidine kinase; Contains at least one GAF domain (IPR003018); Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).	0.564
MCP_0834	MCP_0475	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Putative response regulator.	0.420
MCP_0834	MCP_0835	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Hypothetical protein.	0.483
MCP_0834	MCP_1444	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Putative MCP methyltransferase.	0.453
MCP_0834	MCP_1650	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Putative response regulator.	0.445
MCP_0834	MCP_2253	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Putative signaling protein; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains PAC motif repeats (IPR001610).	0.459
MCP_0834	MCP_2581	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Putative response regulator.	0.538
MCP_0834	MCP_2616	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	Putative histidine kinase; Contains at least one GAF domain (IPR003018); Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).	0.435
MCP_0835	MCP_0834	Hypothetical protein.	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	0.483
MCP_1444	MCP_0834	Putative MCP methyltransferase.	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	0.453
MCP_1444	MCP_2253	Putative MCP methyltransferase.	Putative signaling protein; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains PAC motif repeats (IPR001610).	0.737
MCP_1444	MCP_2616	Putative MCP methyltransferase.	Putative histidine kinase; Contains at least one GAF domain (IPR003018); Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).	0.900
MCP_1650	MCP_0475	Putative response regulator.	Putative response regulator.	0.825
MCP_1650	MCP_0834	Putative response regulator.	Putative histidine kinase; Contains four PAS domains (IPR000014); Contains four PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one histidine kinase A, N-terminal domain (IPR003661).; Contains four PAC motif repeats (IPR001610).	0.445
MCP_1650	MCP_2253	Putative response regulator.	Putative signaling protein; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains PAC motif repeats (IPR001610).	0.597
MCP_1650	MCP_2581	Putative response regulator.	Putative response regulator.	0.627

page 1 of 2

Server load: medium (44%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Textmining

Cooccurrence

Databases

Coexpression

© STRING Consortium 2025

Credits

Access

Info

About