STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0894Putative glycosyltransferase. (521 aa)    
Predicted Functional Partners:
MCP_0896
Putative aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.803
MCP_0897
Conserved hypothetical protein; Contains the Bacterial transferase hexapeptide repeat (IPR001451).
  
  
 0.775
MCP_0893
Putative glycosyltransferase.
  
 0.769
MCP_0895
Putative oxidoreductase.
  
  
 0.767
MCP_0892
Putative glycosyltransferase.
 
  
 0.761
MCP_0891
Hypothetical protein.
       0.681
MCP_2429
Putative glycosyltransferase.
 
     0.628
MCP_0230
Putative dolichyl-phosphate beta-glucosyltransferase.
 
     0.606
MCP_0779
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF354 family (IPR007152).
 
  
 0.481
MCP_2698
Protein kinase; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least three Tetratricopeptide TPR_1 repeats (IPR001440).; Contains at least five Tetratricopeptide TPR_2repeats (IPR013105).
  
 
 0.480
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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