STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifH-2Putative nitrogenase iron protein; Belongs to the NifH/BchL/ChlL family. (283 aa)    
Predicted Functional Partners:
MCP_0903
Nitrogenase associated protein.
 
 0.986
MCP_0904
Nitrogenase associated protein.
 
 0.985
glnA-1
Glutamine synthetase.
  
 
 0.921
glnA-2
Glutamine synthetase.
  
 
 0.921
glnA-3
Glutamine synthetase.
  
 
 0.921
MCP_0793
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.915
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.902
MCP_0363
Conserved hypothetical protein.
 
 
 0.849
MCP_1943
Conserved hypothetical protein; Contains one MoaA/nifB/pqqE, iron-sulphur binding domain (IPR000385); Contains one Radical SAM domain (IPR007197).
 
  
 0.798
MCP_0585
Ammonium transporter.
  
  
 0.699
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.