Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0918 | MCP_0919 | MCP_0918 | MCP_0919 | uracil-DNA glycosylase. | Conserved hypothetical protein. | 0.412 |
MCP_0918 | MCP_1091 | MCP_0918 | MCP_1091 | uracil-DNA glycosylase. | Putative endonuclease IV. | 0.522 |
MCP_0918 | MCP_1451 | MCP_0918 | MCP_1451 | uracil-DNA glycosylase. | Putative endonuclease III. | 0.476 |
MCP_0918 | pycB | MCP_0918 | MCP_0183 | uracil-DNA glycosylase. | Pyruvate carboxylase subunit B. | 0.575 |
MCP_0919 | MCP_0918 | MCP_0919 | MCP_0918 | Conserved hypothetical protein. | uracil-DNA glycosylase. | 0.412 |
MCP_1091 | MCP_0918 | MCP_1091 | MCP_0918 | Putative endonuclease IV. | uracil-DNA glycosylase. | 0.522 |
MCP_1091 | MCP_1451 | MCP_1091 | MCP_1451 | Putative endonuclease IV. | Putative endonuclease III. | 0.826 |
MCP_1451 | MCP_0918 | MCP_1451 | MCP_0918 | Putative endonuclease III. | uracil-DNA glycosylase. | 0.476 |
MCP_1451 | MCP_1091 | MCP_1451 | MCP_1091 | Putative endonuclease III. | Putative endonuclease IV. | 0.826 |
pycB | MCP_0918 | MCP_0183 | MCP_0918 | Pyruvate carboxylase subunit B. | uracil-DNA glycosylase. | 0.575 |