Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
MCP_0919Conserved hypothetical protein. (583 aa)    
Predicted Functional Partners:
MCP_0920
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF555 family (IPR007564).
       0.769
MCP_0918
uracil-DNA glycosylase.
     
 0.541
guaAA
GMP synthase [glutamine-hydrolyzing] subunit A; Catalyzes the synthesis of GMP from XMP.
       0.536
MCP_2066
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF371 family (IPR007171).
  
     0.534
MCP_1944
Conserved hypothetical protein; Belongs to the Peptidase M50 family (IPR008915).
  
     0.489
MCP_0257
Putative TrmB family transcriptional regulator.
  
     0.471
cbiX-2
Sirohydrochlorin cobaltochelatase.
  
     0.467
secG
Putative protein transport protein SEC61 subunit beta homolog; Involved in protein export. The function of the beta subunit is unknown, but it may be involved in stabilization of the trimeric complex.
       0.466
MCP_2786
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF509 family (IPR007510).
  
     0.461
MCP_0043
Conserved hypothetical protein; Belongs to the Sjogrens syndrome scleroderma autoantigen 1family (IPR009563).
       0.458
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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