Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_0920Conserved hypothetical protein; Belongs to the Protein of unknown function DUF555 family (IPR007564). (120 aa)    
Predicted Functional Partners:
MCP_0921
Conserved hypothetical protein; Contains one Protein of unknown function DUF357 domain (IPR007155).
       0.792
MCP_0919
Conserved hypothetical protein.
       0.769
MCP_0922
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF87 family (IPR002789).
       0.769
MCP_0492
Putative transcriptional regulator; Contains an extra Cystathionine-beta-synthase domain (IPR000644) in the C-terminal region.
       0.536
MCP_1239
Putative carbohydrate kinase.
       0.536
dphB
Probable diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
       0.529
MCP_2153
Belongs to the Conserved hypothetical protein 289 family (IPR005237).
       0.529
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
       0.425
rps15p
30S ribosomal protein S15P/S13e.
   
    0.413
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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