STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0934Conserved hypothetical protein; Contains one Metallophosphoesterase domain (IPR004843). (298 aa)    
Predicted Functional Partners:
MCP_0933
Hypothetical protein; Contains at least one Ankyrin repeat (IPR002110).
   
 0.912
MCP_2698
Protein kinase; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least three Tetratricopeptide TPR_1 repeats (IPR001440).; Contains at least five Tetratricopeptide TPR_2repeats (IPR013105).
   
 0.848
MCP_1774
Hypothetical protein; Contains at least one Ankyrin repeatrepeat (IPR002110); Contains at least one PBS lyase HEAT-like repeat (IPR004155).
   
 0.819
MCP_0300
GTP-binding protein.
   
 0.818
MCP_0233
Similar to peptide synthetase AdpD in Anabaena circinalis 90 (Q9K5L9).
   
 0.786
MCP_1214
Conserved hypothetical protein; Contains one Beta-lactamase-like domain (IPR001279); Contains one RNA-metabolising metallo-beta-lactamase domain (IPR011108).
  
 
 0.757
MCP_0151
Conserved hypothetical protein.
  
 
 0.756
eif2a
Translation initiation factor 2 alpha subunit.
   
 
 0.754
dnaK
Heat shock protein 70; Acts as a chaperone.
  
 
 0.751
MCP_0982
Conserved hypothetical protein.
  
 0.740
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.