STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0967Conserved hypothetical protein. (433 aa)    
Predicted Functional Partners:
MCP_0968
Hypothetical protein; Contains one ATPase associated with various cellular activities, AAA-5 domain (IPR011704); Contains one AAA+ ATPase, core domain (IPR003593).
 
 
 0.999
MCP_0965
Hypothetical protein; Contains one DNA methylase N-4/N-6 domain (IPR002941); Contains one N-6 Adenine-specific DNA methylase domain (IPR002052).
       0.520
MCP_0966
Putative DNA methylase.
       0.514
MCP_0969
Conserved hypothetical protein.
       0.513
MCP_0963
Hypothetical protein.
       0.472
MCP_0964
Hypothetical protein.
       0.472
MCP_1554
Conserved hypothetical protein; Contains one N-6 Adenine-specific DNA methylase domain (IPR002052).
 
   
 0.425
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.