STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_0970Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. (464 aa)    
Predicted Functional Partners:
pdhC
Pyruvate dehydrogenase E2 component.
 0.999
pdhB
Pyruvate dehydrogenase E1 component beta subunit.
 0.995
pdhA
Pyruvate dehydrogenase E1 component alpha subunit.
 
 0.984
MCP_0825
Conserved hypothetical protein; Contains one Tetratricopeptide TPR_2 repeat (IPR013105).
  
 0.844
trxA
Thioredoxin.
  
 0.823
MCP_0676
Conserved hypothetical protein; Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro.
  
 0.823
MCP_2131
KaiB homolog.
  
 0.823
MCP_2133
KaiB homolog.
  
 0.823
MCP_2177
Conserved hypothetical protein; Contains one Thioredoxin domain (IPR013766).
  
 0.823
MCP_2276
Conserved hypothetical protein; Contains one Thioredoxin domain (IPR013766).
  
 0.823
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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