Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
MCP_0983Conserved hypothetical protein; Contains one Dual specificity protein phosphatase domain (IPR000340). (179 aa)    
Predicted Functional Partners:
MCP_2698
Protein kinase; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least three Tetratricopeptide TPR_1 repeats (IPR001440).; Contains at least five Tetratricopeptide TPR_2repeats (IPR013105).
  
 0.980
MCP_0982
Conserved hypothetical protein.
 
 0.971
MCP_1774
Hypothetical protein; Contains at least one Ankyrin repeatrepeat (IPR002110); Contains at least one PBS lyase HEAT-like repeat (IPR004155).
 
 
 0.872
MCP_0933
Hypothetical protein; Contains at least one Ankyrin repeat (IPR002110).
 
 
 0.868
MCP_1127
Hypothetical protein; Contains at least five WD-40 repeat repeats (IPR001680).
   
 0.863
MCP_1208
Hypothetical protein; Contains at least one WD-40 repeat (IPR001680).
   
 0.863
MCP_0300
GTP-binding protein.
  
 0.848
tfs
Archaeal transcription factor S.
  
 
 0.800
rpl40e
50S ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.
   
 0.784
MCP_0206
Conserved hypothetical protein; Belongs to the NMD3 family (IPR007064).
   
 
 0.710
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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