Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
MCP_0989Glutamate synthase. (468 aa)    
Predicted Functional Partners:
MCP_0990
Putative oxidoreductase.
 
 
 0.999
MCP_0709
Glutamate synthase large subunit domain 2; Belongs to the glutamate synthase family.
 
 0.997
MCP_0710
Glutamate synthase large subunit domain 1.
  
 
 0.992
MCP_0718
Conserved hypothetical protein; Belongs to the CO dehydrogenase/acetyl-CoA synthase delta subunit family (IPR004486).
  
 
 0.980
iorA
Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
  
 
 0.972
fwdC-1
Tungsten-containing formylmethanofuran dehydrogenase subunit C.
  
 
 0.962
fwdC-2
Tungsten-containing formylmethanofuran dehydrogenase subunit C.
  
 
 0.962
MCP_1678
Conserved hypothetical protein.
  
 
 0.961
glnA-1
Glutamine synthetase.
  
 
 0.959
glnA-2
Glutamine synthetase.
  
 
 0.959
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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