STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1021Conserved hypothetical protein; Contains one Xylose isomerase-like TIM barrel domain (IPR012307); Contains one Protein of unknown function DUF294, nucleotidyltransferase putative domain (IPR005105). (602 aa)    
Predicted Functional Partners:
MCP_1022
Hypothetical protein.
       0.592
MCP_0765
Putative oxidoreductase.
  
  
 0.540
MCP_0852
Putative oxidoreductase.
  
  
 0.540
MCP_0895
Putative oxidoreductase.
  
  
 0.540
MCP_1020
Conserved hypothetical protein.
       0.533
MCP_1345
Putative carbohydrate kinase.
 
  
 0.474
MCP_2360
Aldehyde dehydrogenase.
 
  
 0.469
fba-1
Fructose-bisphosphate aldolase.
  
  
 0.460
MCP_1239
Putative carbohydrate kinase.
  
  
 0.402
MCP_1262
Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.402
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.