Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1083Putative cobalt ABC transporter ATP binding protein. (276 aa)    
Predicted Functional Partners:
MCP_1084
Putative cobalt ABC transporter permease protein.
 
 0.996
MCP_1085
Putative truncated cobalamin biosynthesis protein.
 
 
 0.973
MCP_1086
Putative truncated cobalamin biosynthesis protein.
 
 
 0.968
MCP_0798
Putative cobalt ABC transporter permease protein.
 
 0.967
MCP_1087
Conserved hypothetical protein.
 
 
 0.950
MCP_0797
Putative cobalt ABC transporter ATP binding protein.
  
  
 
0.914
MCP_2984
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
     0.914
MCP_0450
Putative cobalt ABC transporter ATP binding protein.
  
  
 
0.911
MCP_1561
Putative peptide ABC transporter ATP binding protein.
    
0.901
MCP_2983
Putative ABC transporter; Contains one Protein of unknown function DUF214, permase predicted domain (IPR003838).
     0.901
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (20%) [HD]