Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
MCP_0487 | MCP_1103 | Conserved hypothetical protein; Contains at least two Regulator of chromosome condensation, RCC1 repeats (IPR000408). | Hypothetical protein. | 0.766 |
MCP_0487 | MCP_2552 | Conserved hypothetical protein; Contains at least two Regulator of chromosome condensation, RCC1 repeats (IPR000408). | TraB family protein. | 0.742 |
MCP_1102 | MCP_1103 | Conserved hypothetical protein. | Hypothetical protein. | 0.548 |
MCP_1103 | MCP_0487 | Hypothetical protein. | Conserved hypothetical protein; Contains at least two Regulator of chromosome condensation, RCC1 repeats (IPR000408). | 0.766 |
MCP_1103 | MCP_1102 | Hypothetical protein. | Conserved hypothetical protein. | 0.548 |
MCP_1103 | MCP_1625 | Hypothetical protein. | Hypothetical protein; Contains four Regulator of chromosome condensation, RCC1 repeats (IPR000408). | 0.766 |
MCP_1103 | MCP_2552 | Hypothetical protein. | TraB family protein. | 0.657 |
MCP_1625 | MCP_1103 | Hypothetical protein; Contains four Regulator of chromosome condensation, RCC1 repeats (IPR000408). | Hypothetical protein. | 0.766 |
MCP_1625 | MCP_2552 | Hypothetical protein; Contains four Regulator of chromosome condensation, RCC1 repeats (IPR000408). | TraB family protein. | 0.742 |
MCP_2552 | MCP_0487 | TraB family protein. | Conserved hypothetical protein; Contains at least two Regulator of chromosome condensation, RCC1 repeats (IPR000408). | 0.742 |
MCP_2552 | MCP_1103 | TraB family protein. | Hypothetical protein. | 0.657 |
MCP_2552 | MCP_1625 | TraB family protein. | Hypothetical protein; Contains four Regulator of chromosome condensation, RCC1 repeats (IPR000408). | 0.742 |