Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1105ABC transporter ATP binding protein. (315 aa)    
Predicted Functional Partners:
MCP_1106
Putative ABC transporter.
 
  
 0.877
MCP_1195
ABC transporter permease protein.
  
 0.640
MCP_0255
ABC transporter permease protein.
 
  
 0.595
MCP_1104
Conserved hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
   
 
 0.526
MCP_2632
ABC transporter permease protein.
 
  
 0.500
MCP_1846
Putative ABC transporter.
 
  
 0.490
MCP_0564
ABC transporter permease protein.
 
  
 0.482
MCP_1236
Putative ABC transporter.
 
 
 0.454
MCP_0985
Putative ABC transporter.
 
 
 0.447
MCP_0992
Putative ABC transporter.
 
 
 0.441
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.