Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0756 | MCP_1128 | MCP_0756 | MCP_1128 | Putative 4-oxalocrotonate tautomerase. | Putative 4-oxalocrotonate tautomerase. | 0.900 |
MCP_1127 | MCP_1128 | MCP_1127 | MCP_1128 | Hypothetical protein; Contains at least five WD-40 repeat repeats (IPR001680). | Putative 4-oxalocrotonate tautomerase. | 0.547 |
MCP_1127 | MCP_1129 | MCP_1127 | MCP_1129 | Hypothetical protein; Contains at least five WD-40 repeat repeats (IPR001680). | Exodeoxyribonuclease. | 0.586 |
MCP_1128 | MCP_0756 | MCP_1128 | MCP_0756 | Putative 4-oxalocrotonate tautomerase. | Putative 4-oxalocrotonate tautomerase. | 0.900 |
MCP_1128 | MCP_1127 | MCP_1128 | MCP_1127 | Putative 4-oxalocrotonate tautomerase. | Hypothetical protein; Contains at least five WD-40 repeat repeats (IPR001680). | 0.547 |
MCP_1128 | MCP_1129 | MCP_1128 | MCP_1129 | Putative 4-oxalocrotonate tautomerase. | Exodeoxyribonuclease. | 0.776 |
MCP_1128 | MCP_1130 | MCP_1128 | MCP_1130 | Putative 4-oxalocrotonate tautomerase. | Hypothetical protein. | 0.476 |
MCP_1128 | MCP_1131 | MCP_1128 | MCP_1131 | Putative 4-oxalocrotonate tautomerase. | Hypothetical protein. | 0.476 |
MCP_1128 | MCP_1245 | MCP_1128 | MCP_1245 | Putative 4-oxalocrotonate tautomerase. | Putative TrmB family transcriptional regulator. | 0.409 |
MCP_1128 | mptA-1 | MCP_1128 | MCP_1133 | Putative 4-oxalocrotonate tautomerase. | GTP cyclohydrolase; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin. | 0.480 |
MCP_1129 | MCP_1127 | MCP_1129 | MCP_1127 | Exodeoxyribonuclease. | Hypothetical protein; Contains at least five WD-40 repeat repeats (IPR001680). | 0.586 |
MCP_1129 | MCP_1128 | MCP_1129 | MCP_1128 | Exodeoxyribonuclease. | Putative 4-oxalocrotonate tautomerase. | 0.776 |
MCP_1129 | MCP_1130 | MCP_1129 | MCP_1130 | Exodeoxyribonuclease. | Hypothetical protein. | 0.476 |
MCP_1129 | MCP_1131 | MCP_1129 | MCP_1131 | Exodeoxyribonuclease. | Hypothetical protein. | 0.476 |
MCP_1130 | MCP_1128 | MCP_1130 | MCP_1128 | Hypothetical protein. | Putative 4-oxalocrotonate tautomerase. | 0.476 |
MCP_1130 | MCP_1129 | MCP_1130 | MCP_1129 | Hypothetical protein. | Exodeoxyribonuclease. | 0.476 |
MCP_1130 | MCP_1131 | MCP_1130 | MCP_1131 | Hypothetical protein. | Hypothetical protein. | 0.773 |
MCP_1131 | MCP_1128 | MCP_1131 | MCP_1128 | Hypothetical protein. | Putative 4-oxalocrotonate tautomerase. | 0.476 |
MCP_1131 | MCP_1129 | MCP_1131 | MCP_1129 | Hypothetical protein. | Exodeoxyribonuclease. | 0.476 |
MCP_1131 | MCP_1130 | MCP_1131 | MCP_1130 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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