STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1162Putative methyltransferase. (267 aa)    
Predicted Functional Partners:
MCP_1161
Putative oxidoreductase.
 
     0.697
MCP_1163
Conserved hypothetical protein.
 
     0.686
MCP_2781
Putative methyltransferase.
 
   
 0.650
MCP_0902
Methyltransferase.
 
   
 0.626
MCP_0689
Putative methyltransferase.
  
     0.618
MCP_0823
Conserved hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
 
   
 0.548
MCP_2179
Conserved hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
 
   
 0.490
MCP_0974
Hypothetical protein; Contains one Methyltransferase type 11 domain (IPR013216).
  
     0.480
top6A-2
Type II DNA topoisomerase VI subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family.
       0.455
top6B-2
Type II DNA topoisomerase VI subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.
       0.455
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.