Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_1191Conserved hypothetical protein; Contains two Amino acid-binding ACT domains (IPR002912). (144 aa)    
Predicted Functional Partners:
MCP_1192
Phenylacetate-coenzyme A ligase.
 
   0.855
MCP_1193
Phenylacetate-coenzyme A ligase.
 
   0.842
iorB
Indolepyruvate oxidoreductase subunit IorB.
 
    0.630
MCP_1007
Conserved hypothetical protein.
 
   0.572
iorA
Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.571
MCP_1959
Conserved hypothetical protein; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.569
MCP_1663
Conserved hypothetical protein; Belongs to the UPF0285 family.
       0.558
MCP_2810
Putative phosphoesterase.
       0.555
MCP_0440
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.477
MCP_1905
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.466
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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