STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1265Conserved hypothetical protein; Belongs to the Amylo-alpha-1,6-glucosidase family (IPR010401). (727 aa)    
Predicted Functional Partners:
MCP_1264
Putative plasma-membrane proton-efflux P-type ATPase.
       0.648
MCP_0652
Conserved hypothetical protein; Belongs to the NGG1p interacting factor 3, NIF3 family (IPR002678).
   
   0.589
MCP_1267
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.536
ppsA-2
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
       0.533
pgk-2
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
     
 0.527
MCP_1262
Putative carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
     
 0.423
apgM-1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.419
pfkA-1
6-phosphofructokinase.
  
  
 0.418
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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