Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_1314 | MCP_1315 | MCP_1314 | MCP_1315 | Conserved hypothetical protein. | Putative potassium channel protein. | 0.601 |
MCP_1314 | MCP_1316 | MCP_1314 | MCP_1316 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.473 |
MCP_1314 | MCP_1317 | MCP_1314 | MCP_1317 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.408 |
MCP_1314 | MCP_1319 | MCP_1314 | MCP_1319 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.400 |
MCP_1314 | MCP_1467 | MCP_1314 | MCP_1467 | Conserved hypothetical protein. | Belongs to the Conserved hypothetical protein 61 family (IPR004425). | 0.610 |
MCP_1314 | MCP_1468 | MCP_1314 | MCP_1468 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF473 family (IPR007417). | 0.515 |
MCP_1314 | MCP_1916 | MCP_1314 | MCP_1916 | Conserved hypothetical protein. | 4Fe-4S ferredoxin, iron-sulfur binding protein. | 0.479 |
MCP_1314 | MCP_2862 | MCP_1314 | MCP_2862 | Conserved hypothetical protein. | Conserved hypothetical protein; Contains one Pyridoxamine 5'-phosphate oxidase-related, FMN-binding core domain (IPR011576). | 0.639 |
MCP_1314 | mtd | MCP_1314 | MCP_1313 | Conserved hypothetical protein. | F420-dependent methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. | 0.480 |
MCP_1314 | truA | MCP_1314 | MCP_1318 | Conserved hypothetical protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.415 |
MCP_1315 | MCP_1314 | MCP_1315 | MCP_1314 | Putative potassium channel protein. | Conserved hypothetical protein. | 0.601 |
MCP_1315 | MCP_1316 | MCP_1315 | MCP_1316 | Putative potassium channel protein. | Conserved hypothetical protein. | 0.598 |
MCP_1315 | MCP_1317 | MCP_1315 | MCP_1317 | Putative potassium channel protein. | Conserved hypothetical protein. | 0.510 |
MCP_1315 | mtd | MCP_1315 | MCP_1313 | Putative potassium channel protein. | F420-dependent methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. | 0.458 |
MCP_1315 | truA | MCP_1315 | MCP_1318 | Putative potassium channel protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.510 |
MCP_1316 | MCP_1314 | MCP_1316 | MCP_1314 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.473 |
MCP_1316 | MCP_1315 | MCP_1316 | MCP_1315 | Conserved hypothetical protein. | Putative potassium channel protein. | 0.598 |
MCP_1316 | MCP_1317 | MCP_1316 | MCP_1317 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.651 |
MCP_1316 | MCP_1319 | MCP_1316 | MCP_1319 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.476 |
MCP_1316 | truA | MCP_1316 | MCP_1318 | Conserved hypothetical protein. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.651 |
page 1 of 3