Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_1334TRAP transporter membrane-spanning component. (691 aa)    
Predicted Functional Partners:
MCP_1332
TRAP transporter solute-binding component; Similar to 31 kDa immunogenic protein [Precursor] in Brucella melitensis and Brucella abortus (P0A3T2, P0A3T3).
  
 0.992
MCP_1333
Conserved hypothetical protein.
 
    0.921
dtdA
D-tyrosyl-tRNA(Tyr) deacylase/cell division protein FtsZ homolog; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo; Belongs to the FtsZ family.
       0.582
MCP_1336
Conserved hypothetical protein; Contains one Protein of unknown function DUF362 domain (IPR007160).
       0.558
MCP_1335
Conserved hypothetical protein.
       0.550
MCP_1337
Conserved hypothetical protein; Contains one Beta-lactamase-like domain (IPR001279); Belongs to the UPF0173 family.
       0.436
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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