STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1336Conserved hypothetical protein; Contains one Protein of unknown function DUF362 domain (IPR007160). (396 aa)    
Predicted Functional Partners:
MCP_1335
Conserved hypothetical protein.
       0.773
MCP_0164
Conserved hypothetical protein; Belongs to the Protein of unknown function DUF362 family (IPR007160); Contains at least one 4Fe-4S ferredoxin, iron-sulfur binding domain (IPR001450).
  
     0.649
MCP_0715
Conserved hypothetical protein; Contains one Protein of unknown function DUF362 domain (IPR007160).
  
     0.643
MCP_1337
Conserved hypothetical protein; Contains one Beta-lactamase-like domain (IPR001279); Belongs to the UPF0173 family.
       0.594
MCP_1334
TRAP transporter membrane-spanning component.
       0.568
MCP_0079
Conserved hypothetical protein; Contains one Protein of unknown function DUF362 domain (IPR007160).
  
     0.485
MCP_0274
Conserved hypothetical protein; Contains two 4Fe-4S ferredoxin, iron-sulfur binding domains (IPR001450).
 
     0.403
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.