STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1337Conserved hypothetical protein; Contains one Beta-lactamase-like domain (IPR001279); Belongs to the UPF0173 family. (226 aa)    
Predicted Functional Partners:
MCP_0715
Conserved hypothetical protein; Contains one Protein of unknown function DUF362 domain (IPR007160).
      0.626
MCP_1336
Conserved hypothetical protein; Contains one Protein of unknown function DUF362 domain (IPR007160).
       0.594
MCP_1335
Conserved hypothetical protein.
       0.590
MCP_0233
Similar to peptide synthetase AdpD in Anabaena circinalis 90 (Q9K5L9).
  
  
 0.540
MCP_0861
Similar to 3-hexulose-6-phosphate synthase in Methanosarcina barkeri (Q46DA4).
     
 0.451
MCP_1334
TRAP transporter membrane-spanning component.
       0.434
MCP_1338
Putative transposase orfA for insertion sequence element.
       0.431
MCP_1339
Putative transposase orfB for insertion sequence element.
       0.431
MCP_2427
Putative glycerophosphoryl diester phosphodiesterase.
     
 0.416
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.