MCP_1385 protein (Methanocella paludicola) - STRING interaction network

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Score

MCP_1385

Exoribonuclease II. (498 aa)

Predicted Functional Partners:

rrp41

0.971

csl4

0.969

rrp42

0.969

rrp4

0.965

MCP_1749

0.930

rps7p

0.856

rps17p

0.852

rps15p

0.837

rps4p

0.837

rps12p

0.833

Your Current Organism:

Methanocella paludicola

NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MCP_1385	MCP_1749	MCP_1385	MCP_1749	Exoribonuclease II.	NUDIX hydrolase.	0.930
MCP_1385	csl4	MCP_1385	MCP_1505	Exoribonuclease II.	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	0.969
MCP_1385	rps12p	MCP_1385	MCP_1222	Exoribonuclease II.	30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	0.833
MCP_1385	rps15p	MCP_1385	MCP_1742	Exoribonuclease II.	30S ribosomal protein S15P/S13e.	0.837
MCP_1385	rps17p	MCP_1385	MCP_2230	Exoribonuclease II.	30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.852
MCP_1385	rps4p	MCP_1385	MCP_2256	Exoribonuclease II.	30S ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.837
MCP_1385	rps7p	MCP_1385	MCP_1223	Exoribonuclease II.	30S ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.856
MCP_1385	rrp4	MCP_1385	MCP_2628	Exoribonuclease II.	Putative exosome complex RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome.	0.965
MCP_1385	rrp41	MCP_1385	MCP_2627	Exoribonuclease II.	Putative exosome complex exonuclease 1; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails.	0.971
MCP_1385	rrp42	MCP_1385	MCP_2626	Exoribonuclease II.	Probable exosome complex exonuclease 2; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site.	0.969
MCP_1749	MCP_1385	MCP_1749	MCP_1385	NUDIX hydrolase.	Exoribonuclease II.	0.930
MCP_1749	csl4	MCP_1749	MCP_1505	NUDIX hydrolase.	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	0.767
MCP_1749	rrp4	MCP_1749	MCP_2628	NUDIX hydrolase.	Putative exosome complex RNA-binding protein; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Confers strong poly(A) specificity to the exosome.	0.761
MCP_1749	rrp41	MCP_1749	MCP_2627	NUDIX hydrolase.	Putative exosome complex exonuclease 1; Catalytic component of the exosome, which is a complex involved in RNA degradation. Has 3'->5' exoribonuclease activity. Can also synthesize heteropolymeric RNA-tails.	0.834
MCP_1749	rrp42	MCP_1749	MCP_2626	NUDIX hydrolase.	Probable exosome complex exonuclease 2; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Contributes to the structuring of the Rrp41 active site.	0.796
csl4	MCP_1385	MCP_1505	MCP_1385	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	Exoribonuclease II.	0.969
csl4	MCP_1749	MCP_1505	MCP_1749	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	NUDIX hydrolase.	0.767
csl4	rps12p	MCP_1505	MCP_1222	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	30S ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	0.752
csl4	rps15p	MCP_1505	MCP_1742	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	30S ribosomal protein S15P/S13e.	0.760
csl4	rps17p	MCP_1505	MCP_2230	Putative 3'-5' exoribonuclease; Non-catalytic component of the exosome, which is a complex involved in RNA degradation. Increases the RNA binding and the efficiency of RNA degradation. Helpful for the interaction of the exosome with A-poor RNAs.	30S ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.786

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