STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1388Putative histidine kinase; Contains one PAS domain (IPR000014); Contains one PAS-associated, C-terminal domain (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains one Histidine kinase, HAMP region domain (IPR003660).; Contains one Histidine kinase A, N-terminal domain (IPR003661).; Contains one Cache domain (IPR004010). (725 aa)    
Predicted Functional Partners:
MCP_2581
Putative response regulator.
 
   
 0.682
MCP_1387
Putative histidine kinase; Contains two PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains one ATP-binding region, ATPase-like domain (IPR003594).; Contains two PAC motif repeats (IPR001610).
 
    
0.572
MCP_0475
Putative response regulator.
 
     0.507
MCP_1650
Putative response regulator.
 
   
 0.501
MCP_0444
Aldo/keto reductase family protein.
   
 0.469
MCP_1386
Conserved hypothetical protein; Contains one Beta-lactamase-like domain (IPR001279).
       0.455
MCP_1435
Putative signaling protein; Contains four PAS domains (IPR000014); Contains two PAS-associated, C-terminal domains (IPR000700).; Contains three PAC motif repeats (IPR001610).
 
     0.433
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.