Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_1449 | MCP_1450 | MCP_1449 | MCP_1450 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | MFS transporter. | 0.671 |
MCP_1449 | MCP_1451 | MCP_1449 | MCP_1451 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | Putative endonuclease III. | 0.686 |
MCP_1449 | aspC-1 | MCP_1449 | MCP_1452 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | Aspartate aminotransferase. | 0.401 |
MCP_1449 | aspC-2 | MCP_1449 | MCP_1455 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | Aspartate aminotransferase. | 0.439 |
MCP_1449 | nfi | MCP_1449 | MCP_1458 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. | 0.506 |
MCP_1449 | pdxS | MCP_1449 | MCP_1448 | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. | 0.416 |
MCP_1450 | MCP_1449 | MCP_1450 | MCP_1449 | MFS transporter. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | 0.671 |
MCP_1450 | MCP_1451 | MCP_1450 | MCP_1451 | MFS transporter. | Putative endonuclease III. | 0.606 |
MCP_1450 | aspC-1 | MCP_1450 | MCP_1452 | MFS transporter. | Aspartate aminotransferase. | 0.504 |
MCP_1450 | aspC-2 | MCP_1450 | MCP_1455 | MFS transporter. | Aspartate aminotransferase. | 0.455 |
MCP_1451 | MCP_1449 | MCP_1451 | MCP_1449 | Putative endonuclease III. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | 0.686 |
MCP_1451 | MCP_1450 | MCP_1451 | MCP_1450 | Putative endonuclease III. | MFS transporter. | 0.606 |
MCP_1451 | aspC-1 | MCP_1451 | MCP_1452 | Putative endonuclease III. | Aspartate aminotransferase. | 0.660 |
MCP_1451 | aspC-2 | MCP_1451 | MCP_1455 | Putative endonuclease III. | Aspartate aminotransferase. | 0.514 |
MCP_1451 | nfi | MCP_1451 | MCP_1458 | Putative endonuclease III. | Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. | 0.423 |
aspC-1 | MCP_1449 | MCP_1452 | MCP_1449 | Aspartate aminotransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | 0.401 |
aspC-1 | MCP_1450 | MCP_1452 | MCP_1450 | Aspartate aminotransferase. | MFS transporter. | 0.504 |
aspC-1 | MCP_1451 | MCP_1452 | MCP_1451 | Aspartate aminotransferase. | Putative endonuclease III. | 0.660 |
aspC-1 | aspC-2 | MCP_1452 | MCP_1455 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.804 |
aspC-2 | MCP_1449 | MCP_1455 | MCP_1449 | Aspartate aminotransferase. | Conserved hypothetical protein; Belongs to the Protein of unknown function DUF82 family (IPR002782). | 0.439 |
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