Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_1512Nitroreductase. (200 aa)    
Predicted Functional Partners:
MCP_0233
Similar to peptide synthetase AdpD in Anabaena circinalis 90 (Q9K5L9).
  
 
 0.593
MCP_0554
Conserved hypothetical protein; Contains one YcaO_like domain (IPR003776).
 
  
 0.561
MCP_1511
Conserved hypothetical protein.
       0.556
MCP_0232
Putative acyl-CoA synthetase.
   
 
 0.521
MCP_1724
Putative acyl-CoA synthetase.
   
 
 0.521
MCP_1513
Conserved hypothetical protein.
       0.465
MCP_0684
ABC transporter permease protein.
 
  
 0.453
MCP_0255
ABC transporter permease protein.
  
  
 0.452
MCP_1868
ABC transporter permease protein.
 
  
 0.446
MCP_1514
Nitroreductase.
 
    
0.438
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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