STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fwdD-1Tungsten-containing formylmethanofuran dehydrogenase subunit D. (137 aa)    
Predicted Functional Partners:
fwdF-1
Tungsten-containing formylmethanofuran dehydrogenase subunit F.
 
 0.999
fwdC-1
Tungsten-containing formylmethanofuran dehydrogenase subunit C.
 
 0.998
fwdA-1
Tungsten-containing formylmethanofuran dehydrogenase subunit A.
 
 0.998
fwdB-1
Tungsten-containing formylmethanofuran dehydrogenase subunit B.
 
 
 0.998
fwdG-1
Tungsten-containing formylmethanofuran dehydrogenase subunit G.
 
 0.998
fwdF-2
Tungsten-containing formylmethanofuran dehydrogenase subunit F.
 
 0.997
fwdC-2
Tungsten-containing formylmethanofuran dehydrogenase subunit C.
 
 0.995
fwdG-2
Tungsten-containing formylmethanofuran dehydrogenase subunit G.
 
 0.994
fdhB-1
Formate dehydrogenase beta chain.
 
 
 0.978
fdhA-1
Formate dehydrogenase alpha chain.
   
  0.963
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.