Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0056 | MCP_0139 | MCP_0056 | MCP_0139 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.921 |
MCP_0056 | MCP_1586 | MCP_0056 | MCP_1586 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein. | 0.570 |
MCP_0056 | MCP_2437 | MCP_0056 | MCP_2437 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.919 |
MCP_0056 | hflX | MCP_0056 | MCP_2659 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.499 |
MCP_0056 | rnj | MCP_0056 | MCP_1636 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.570 |
MCP_0139 | MCP_0056 | MCP_0139 | MCP_0056 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.921 |
MCP_0139 | MCP_1586 | MCP_0139 | MCP_1586 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein. | 0.570 |
MCP_0139 | MCP_2437 | MCP_0139 | MCP_2437 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.917 |
MCP_0139 | hflX | MCP_0139 | MCP_2659 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.443 |
MCP_0139 | rnj | MCP_0139 | MCP_1636 | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein; An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Archaeal RNase J subfamily. | 0.838 |
MCP_1078 | MCP_1586 | MCP_1078 | MCP_1586 | ABC transporter substrate binding protein. | Conserved hypothetical protein. | 0.495 |
MCP_1584 | MCP_1585 | MCP_1584 | MCP_1585 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.753 |
MCP_1584 | MCP_1586 | MCP_1584 | MCP_1586 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.522 |
MCP_1584 | hflX | MCP_1584 | MCP_2659 | Conserved hypothetical protein. | GTP-binding protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family. | 0.458 |
MCP_1585 | MCP_1584 | MCP_1585 | MCP_1584 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.753 |
MCP_1585 | MCP_1586 | MCP_1585 | MCP_1586 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.534 |
MCP_1586 | MCP_0056 | MCP_1586 | MCP_0056 | Conserved hypothetical protein. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.570 |
MCP_1586 | MCP_0139 | MCP_1586 | MCP_0139 | Conserved hypothetical protein. | Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. | 0.570 |
MCP_1586 | MCP_1078 | MCP_1586 | MCP_1078 | Conserved hypothetical protein. | ABC transporter substrate binding protein. | 0.495 |
MCP_1586 | MCP_1584 | MCP_1586 | MCP_1584 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.522 |
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