STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1606Adenine-specific methyltransferase. (312 aa)    
Predicted Functional Partners:
MCP_1607
Putative DNA methylase.
 
  
 0.852
MCP_1605
Conserved hypothetical protein.
     
 0.697
MCP_0965
Hypothetical protein; Contains one DNA methylase N-4/N-6 domain (IPR002941); Contains one N-6 Adenine-specific DNA methylase domain (IPR002052).
 
  
 0.614
MCP_0966
Putative DNA methylase.
 
  
 0.554
MCP_0311
Conserved hypothetical protein.
  
    0.500
MCP_1554
Conserved hypothetical protein; Contains one N-6 Adenine-specific DNA methylase domain (IPR002052).
 
   
 0.483
MCP_1626
Putative DNA methylase; Similar to Modification methylase in Methanococcus jannaschii (Q58392) and Methanobacterium thermoformicicum (P29568).
 
  
 0.479
MCP_0320
Conserved hypothetical protein.
  
    0.471
MCP_2216
Putative DNA methylase; Similar to Modification methylase in Methanococcus jannaschii (Q58392) and Methanobacterium thermoformicicum (P29568).
 
  
 0.470
MCP_1604
Conserved hypothetical protein.
       0.463
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.