STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCP_1610Hypothetical protein; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least one Tetratricopeptide TPR_2 repeat (IPR013105).; Contains at least one Tetratricopeptide TPR_1 repeat (IPR001440). (388 aa)    
Predicted Functional Partners:
MCP_1609
Hypothetical protein; Contains one ATP-binding region, ATPase-like domain (IPR003594).
       0.775
MCP_2683
Conserved hypothetical protein; Contains at least four Tetratricopeptide region domains (IPR013026); Contains at least five Tetratricopeptide TPR_2 repeats (IPR013105).; Contains at least six Tetratricopeptide TPR_1 repeats (IPR001440).
 
     0.692
MCP_1229
Hypothetical protein; Contains at least one Tetratricopeptide region domain (IPR013026); Contains at least four Tetratricopeptide TPR_2 repeats (IPR013105).; Contains at least four Tetratricopeptide TPR_1 repeats (IPR001440).
 
     0.684
MCP_2662
Hypothetical protein.
 
     0.633
MCP_1259
Conserved hypothetical protein.
 
     0.593
MCP_1611
Putative nucleotidyl transferase.
       0.551
MCP_1612
Conserved hypothetical protein.
       0.551
MCP_1769
Conserved hypothetical protein; Contains at least one Tetratricopeptide region domain (IPR013026); Contains five Tetratricopeptide TPR_1 repeats (IPR001440).
 
     0.502
MCP_2027
Hypothetical protein; Contains two Tetratricopeptide TPR_2 repeat (IPR013105).
 
     0.457
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.