Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MCP_0292 | MCP_1515 | MCP_0292 | MCP_1515 | Conserved hypothetical protein. | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | 0.658 |
MCP_0292 | MCP_1516 | MCP_0292 | MCP_1516 | Conserved hypothetical protein. | Archaeosine tRNA-ribosyltransferase. | 0.867 |
MCP_0292 | MCP_1648 | MCP_0292 | MCP_1648 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0179 family (IPR005369). | 0.649 |
MCP_0292 | MCP_1743 | MCP_0292 | MCP_1743 | Conserved hypothetical protein. | Putative single-stranded-DNA-specific exonuclease RecJ. | 0.419 |
MCP_0292 | MCP_1751 | MCP_0292 | MCP_1751 | Conserved hypothetical protein. | Conserved hypothetical protein; Similar to JAMM-like protein in Archaeoglobus fulgidus (O28085, AF_2198). | 0.688 |
MCP_0292 | MCP_2599 | MCP_0292 | MCP_2599 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.652 |
MCP_0292 | MCP_2870 | MCP_0292 | MCP_2870 | Conserved hypothetical protein. | Putative HTH-type transcriptional regulator. | 0.672 |
MCP_0292 | mptD | MCP_0292 | MCP_0388 | Conserved hypothetical protein. | Conserved hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | 0.638 |
MCP_0292 | recJ | MCP_0292 | MCP_0668 | Conserved hypothetical protein. | Single-stranded DNA-specific exonuclease RecJ. | 0.488 |
MCP_0292 | rpl39e | MCP_0292 | MCP_0013 | Conserved hypothetical protein. | 50S ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family. | 0.560 |
MCP_1515 | MCP_0292 | MCP_1515 | MCP_0292 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Conserved hypothetical protein. | 0.658 |
MCP_1515 | MCP_1516 | MCP_1515 | MCP_1516 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Archaeosine tRNA-ribosyltransferase. | 0.941 |
MCP_1515 | MCP_1648 | MCP_1515 | MCP_1648 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Conserved hypothetical protein; Belongs to the Protein of unknown function UPF0179 family (IPR005369). | 0.659 |
MCP_1515 | MCP_1743 | MCP_1515 | MCP_1743 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Putative single-stranded-DNA-specific exonuclease RecJ. | 0.481 |
MCP_1515 | MCP_1751 | MCP_1515 | MCP_1751 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Conserved hypothetical protein; Similar to JAMM-like protein in Archaeoglobus fulgidus (O28085, AF_2198). | 0.511 |
MCP_1515 | MCP_2599 | MCP_1515 | MCP_2599 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Conserved hypothetical protein. | 0.618 |
MCP_1515 | MCP_2870 | MCP_1515 | MCP_2870 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Putative HTH-type transcriptional regulator. | 0.638 |
MCP_1515 | mptD | MCP_1515 | MCP_0388 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Conserved hypothetical protein; Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD); Belongs to the archaeal dihydroneopterin aldolase family. | 0.535 |
MCP_1515 | recJ | MCP_1515 | MCP_0668 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | Single-stranded DNA-specific exonuclease RecJ. | 0.445 |
MCP_1515 | rpl39e | MCP_1515 | MCP_0013 | Belongs to the Conserved hypothetical protein 1210 family (IPR005909). | 50S ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family. | 0.515 |
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