Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
MCP_1711Putative NADH dehydrogenase. (171 aa)    
Predicted Functional Partners:
MCP_0233
Similar to peptide synthetase AdpD in Anabaena circinalis 90 (Q9K5L9).
  
 
 0.593
MCP_1713
Homoserine dehydrogenase.
       0.549
MCP_1712
Putative amino acid-binding protein.
       0.544
MCP_0232
Putative acyl-CoA synthetase.
   
 
 0.521
MCP_1724
Putative acyl-CoA synthetase.
   
 
 0.521
MCP_0554
Conserved hypothetical protein; Contains one YcaO_like domain (IPR003776).
  
  
 0.492
MCP_0255
ABC transporter permease protein.
  
  
 0.452
MCP_1714
Hypothetical protein.
       0.438
MCP_1715
Hypothetical protein.
       0.400
Your Current Organism:
Methanocella paludicola
NCBI taxonomy Id: 304371
Other names: M. paludicola SANAE, Methanocella paludicola SANAE, methanogenic archaeon SANAE, methanogenic archaeon str. SANAE, methanogenic archaeon strain SANAE
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